LOCUS NC_004551 925938 bp DNA circular BCT 24-MAY-2007
DEFINITION Tropheryma whipplei TW08/27, complete genome.
ACCESSION NC_004551
VERSION NC_004551.1 GI:28572175
KEYWORDS .
SOURCE Tropheryma whipplei TW08/27
ORGANISM Tropheryma whipplei TW08/27
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Micrococcineae; Cellulomonadaceae; Tropheryma.
REFERENCE 1 (bases 1 to 925938)
AUTHORS Bentley,S.D., Maiwald,M., Murphy,L.D., Pallen,M.J., Yeats,C.A.,
Dover,L.G., Norbertczak,H.T., Besra,G.S., Quail,M.A., Harris,D.E.,
von Herbay,A., Goble,A., Rutter,S., Squares,R., Squares,S.,
Barrell,B.G., Parkhill,J. and Relman,D.A.
TITLE Sequencing and analysis of the genome of the Whipple's disease
bacterium Tropheryma whipplei
JOURNAL Lancet 361 (9358), 637-644 (2003)
PUBMED 12606174
REFERENCE 2 (bases 1 to 925938)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (27-FEB-2003) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 925938)
AUTHORS Bentley,S.D.
TITLE Direct Submission
JOURNAL Submitted (10-FEB-2003) Submitted on behalf of the Pathogen
Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus,
Hinxton, Cambridge CB10 1SA E-mail: sdb@sanger.ac.uk
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BX072543.
COMPLETENESS: full length.
Расположение РНК[]
Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
---|---|---|---|---|---|---|---|
9278 | 9351 | + | 74 | 28572175 | TWt01 | - | 14 Ile tRNA |
9365 | 9441 | + | 77 | 28572175 | TWt02 | - | 02 Ala tRNA |
62075 | 62151 | - | 77 | 28572175 | TWt03 | - | 16 Met tRNA |
62170 | 62241 | - | 72 | 28572175 | TWt04 | - | 12 Thr tRNA |
62810 | 62892 | - | 83 | 28572175 | TWt05 | - | 18 Tyr tRNA |
106618 | 106694 | - | 77 | 28572175 | TWt06 | - | 03 Pro tRNA |
130466 | 130552 | + | 87 | 28572175 | TWt07 | - | 08 Ser tRNA |
187804 | 187874 | - | 71 | 28572175 | TWt08 | - | 05 Gln tRNA |
193050 | 193125 | - | 76 | 28572175 | TWt09 | - | 17 Phe tRNA |
193131 | 193204 | - | 74 | 28572175 | TWt10 | - | 06 Asp tRNA |
193214 | 193289 | - | 76 | 28572175 | TWt11 | - | 04 Glu tRNA |
282872 | 282944 | + | 73 | 28572175 | TWt12 | - | 04 Glu tRNA |
305818 | 305891 | + | 74 | 28572175 | TWt13 | - | 02 Ala tRNA |
315950 | 316020 | - | 71 | 28572175 | TWt14 | - | 01 Gly tRNA |
316230 | 316303 | + | 74 | 28572175 | TWt15 | - | 03 Pro tRNA |
335403 | 335478 | + | 76 | 28572175 | TWt16 | - | 02 Ala tRNA |
396563 | 396635 | - | 73 | 28572175 | TWt17 | - | 11 Arg tRNA |
397480 | 397552 | + | 73 | 28572175 | TWt18 | - | 09 His tRNA |
412019 | 412090 | - | 72 | 28572175 | TWt19 | - | 13 Val tRNA |
412138 | 412209 | - | 72 | 28572175 | TWt20 | - | 13 Val tRNA |
412225 | 412295 | - | 71 | 28572175 | TWt21 | - | 19 Cys tRNA |
412340 | 412411 | - | 72 | 28572175 | TWt22 | - | 01 Gly tRNA |
456763 | 456838 | - | 76 | 28572175 | TWt23 | - | 11 Arg tRNA |
464292 | 464364 | + | 73 | 28572175 | TWt24 | - | 12 Thr tRNA |
479104 | 479177 | + | 74 | 28572175 | TWt25 | - | 16 Met tRNA |
495533 | 495619 | - | 87 | 28572175 | TWt26 | - | 15 Leu tRNA |
519126 | 519211 | + | 86 | 28572175 | TWt27 | - | 15 Leu tRNA |
520790 | 520861 | - | 72 | 28572175 | TWt28 | - | 11 Arg tRNA |
521849 | 521921 | - | 73 | 28572175 | TWt29 | - | 07 Asn tRNA |
552644 | 552717 | - | 74 | 28572175 | TWt30 | - | 13 Val tRNA |
598812 | 598883 | - | 72 | 28572175 | TWt31 | - | 05 Gln tRNA |
614058 | 614133 | - | 76 | 28572175 | TWt32 | - | 10 Lys tRNA |
616144 | 616510 | - | 367 | 28572175 | TWs01 | - | |
676717 | 676836 | - | 120 | 28572175 | TWr01 | - | 5S ribosomal RNA |
676889 | 679989 | - | 3101 | 28572175 | TWr02 | - | 23S ribosomal RNA |
680284 | 681809 | - | 1526 | 28572175 | TWr03 | - | 16S ribosomal RNA |
709498 | 709573 | + | 76 | 28572175 | TWt33 | - | 04 Glu tRNA |
709583 | 709656 | + | 74 | 28572175 | TWt34 | - | 06 Asp tRNA |
709662 | 709737 | + | 76 | 28572175 | TWt35 | - | 17 Phe tRNA |
725183 | 725263 | + | 81 | 28572175 | TWt36 | - | 15 Leu tRNA |
729293 | 729366 | + | 74 | 28572175 | TWt37 | - | 04 Glu tRNA |
729376 | 729449 | + | 74 | 28572175 | TWt38 | - | 06 Asp tRNA |
729455 | 729530 | + | 76 | 28572175 | TWt39 | - | 17 Phe tRNA |
733163 | 733236 | - | 74 | 28572175 | TWt40 | - | 16 Met tRNA |
772144 | 772216 | - | 73 | 28572175 | TWt41 | - | 10 Lys tRNA |
804530 | 804603 | - | 74 | 28572175 | TWt42 | - | 12 Thr tRNA |
818979 | 819052 | + | 74 | 28572175 | TWt43 | - | 03 Pro tRNA |
827040 | 827112 | - | 73 | 28572175 | TWt44 | - | 20 Trp tRNA |
837870 | 837954 | + | 85 | 28572175 | TWt45 | - | 08 Ser tRNA |
839215 | 839303 | + | 89 | 28572175 | TWt46 | - | 08 Ser tRNA |
839328 | 839400 | + | 73 | 28572175 | TWt47 | - | 11 Arg tRNA |
886799 | 886883 | + | 85 | 28572175 | TWt48 | - | 08 Ser tRNA |
888014 | 888097 | - | 84 | 28572175 | TWt49 | - | 15 Leu tRNA |
896275 | 896348 | - | 74 | 28572175 | TWt50 | - | 15 Leu tRNA |
903296 | 903369 | + | 74 | 28572175 | TWt51 | - | 01 Gly tRNA |